Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17310g00001 ATGTTACTGAAAATTGGATCAGCTGATGATGTTACAACCCTTGGCTTATGGGGCATGGGTGGTATGGGAAAGACCACTCTGGCTAAATATGCATATGATAAACTGTCTTTTCAATTTGAACGTCGTTGTTTCCTGGAAAATGTAAGGGAAGAATCTACCAGGTCCGGACTCCCAGCTGTACGTAAACTTTTTCTTTCTAAATTGTTTGAGTGTCCAGTTAATGCACTTGATGTAGATACTGGAATTTTAGAAAGAAGACTTGCAAGTGAAAAAAGTTTAATTGTGTTGGATGATGTGGCAACTTTAGAGCAAGCAGAAAATCTTAACATGTGCTTGGGACCAGGTAGTAGAGTCATTGTCACAACTAGAGATAAAGAAATATTTAGTGAGTTTAATGGATGTGAAATTTATGAGGTTCAAGGATTGGACGAAGATGACTCTCTTCAACTATTCTGTGTGCATGCCTTCCTGACAAAACATGCTAAAGTTGGATATGAAGAGCTCTCAGAAAGGGCAACTAGGTATTGCGGAGGCAATCCTCTGGCTTTAAAAGTCTTAGGTGCGAATTTCGGTACAAAAAGTAAAGAAGTGTGGGAAAGTGAATTGGAGAAGCTCAAAAAGATTCCTAATGGGAGAATTCATGAAGTGTTAAAATTGAGTTTCAATGACTTAGATTCTGCTCAACAAGACATATTTCTAGACATTGCATGCTTCTTCGAGTTAAAATTACATTATAGGGATGTTGGTGATGATCCTCTAATGACAGAGGTATTGGATGCTTGCGGTTTTTTTGCAGTAAGTGGGATAGAAGCCCTTTGCAATAAAGCACTCATAACTCGTAATTCTGATTCAATTGAAATGCATGATTTGTTAGTAGAAATGGGACGAGAGATTGTTAATGAAGAATCTCGTAAACACCCCGGAAGAAGAAGTCGATTGTGGGATTCTAAGGAAGTGTATGATGTATTGAAATATAACAAGGGAACCGAAGATGTTGAAGTTATAAGTTTCTATATGGAACGGTCCAAAATTGAGGATCTATACTTGAGCTCTGATTCCTTTAAAAGCATGATCAACTTAAGATATCTTCATATCACCTATAATAGTTTTTTTGAAAGCAAGGCTTGTAGTACTGAAGATGACCCGTGGCAAGCTTAG 1158 0.3756 MLLKIGSADDVTTLGLWGMGGMGKTTLAKYAYDKLSFQFERRCFLENVREESTRSGLPAVRKLFLSKLFECPVNALDVDTGILERRLASEKSLIVLDDVATLEQAENLNMCLGPGSRVIVTTRDKEIFSEFNGCEIYEVQGLDEDDSLQLFCVHAFLTKHAKVGYEELSERATRYCGGNPLALKVLGANFGTKSKEVWESELEKLKKIPNGRIHEVLKLSFNDLDSAQQDIFLDIACFFELKLHYRDVGDDPLMTEVLDACGFFAVSGIEALCNKALITRNSDSIEMHDLLVEMGREIVNEESRKHPGRRSRLWDSKEVYDVLKYNKGTEDVEVISFYMERSKIEDLYLSSDSFKSMINLRYLHITYNSFFESKACSTEDDPWQA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17310g00001 385 SUPERFAMILY "Winged helix" DNA-binding domain 212 324 IPR036390 -
Trme17310g00001 385 Pfam NB-ARC domain 10 220 IPR002182 GO:0043531
Trme17310g00001 385 PRINTS Disease resistance protein signature 176 190 - -
Trme17310g00001 385 PRINTS Disease resistance protein signature 86 100 - -
Trme17310g00001 385 PRINTS Disease resistance protein signature 13 28 - -
Trme17310g00001 385 Gene3D - 141 225 IPR042197 -
Trme17310g00001 385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 367 IPR044974 GO:0006952
Trme17310g00001 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 235 IPR027417 -
Trme17310g00001 385 Gene3D - 1 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17310g00001 Trme-Chr17310 36 1395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17310g00001 10 365 WRKY Transcription Factor Family AT5G45050 32.800 2.07e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17310g00001 - - psat:127083478 413.69