Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme173098g00001 ATGGCTCAAACAGGAATTTTAGTATCTATAAATGGGGAAGTAGCTGGGGTTTTAGCAATATCTGATCCATTGAAACCAGGTGCTCAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGGGACAACTGGGGAACTGCTAATTCCATTGCCAGGGAAGTTGGAATTGAAGATGTTATTGCTGAAGCCAAACC 212 0.4151 MAQTGILVSINGEVAGVLAISDPLKPGAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIEDVIAEAKP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme173098g00001 71 Gene3D - 3 24 IPR023299 GO:0000166
Trme173098g00001 71 FunFam copper-transporting ATPase 1 isoform X2 18 63 - -
Trme173098g00001 71 Pfam haloacid dehalogenase-like hydrolase 11 71 - -
Trme173098g00001 71 SUPERFAMILY HAD-like 7 69 IPR036412 -
Trme173098g00001 71 Gene3D - 25 71 IPR023214 -
Trme173098g00001 71 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme173098g00001 Trme-Chr173098 281 492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme173098g00001 1 71 Primary Pumps ATPases AT1G63440 83.099 2.77e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme173098g00001 K17686 - qsa:O6P43_034232 129.798