Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17306g00001 ATGCAAGAAGTCCTTGAAAACCTAGAATATCTTGCAAGCAAAAAGGATATCCTAGGTTTGAAAGAGGCTAGTAGTACTAGTGGTAACCATGTGTATCAAAAACTGCCATCAACATCTTTGCCGGTTGACTCGGTTATTTATGGTAGAGATTTTGACAAGGAGGTTATCTGTGATTGGCTGATATCTGATGCTGAGAATGTTAATCATCATCTTTCAATAGTTTCTATTGTTGGTATGGGCGGGATAGGTAAGACCACACTTGCTCAACATCTATACAATGACCCAAAGATGGAGGATACATTCGATATCAAAGCTTGGGTCTGTGTGTCAGAAGAATTTGATGTTTTAGAGCTAACAAGAGTAATTGTTGAGGCAATCACTGGAACAAGAAACAATACCAAAGTCCTAGATTTGCTTCAAGTGAAGCTGAAGGAAACACTGTCTGGGAAAAGATTTCTTCTTGTTTTGGATGACCTTTGGAACGAAAAACGTGACCAATGGGAAGCTTTGCAGATTCCTTTTAATTATGGGGCTCCGGGAAGCAAAATTCTTGTCACTACCCGTAGCCTAAAAGTTGCCTCAACCACACGGTCAACTAAAATACATCAGCTAGAGGAATTAGCAGAAGAACATTGTTGGAAGTTGTTTTGCAAACATGCCTTCCTAGATGAAAATCCTCAAATGAATCCCGACTTTAAGGATATTGCTAAAAGGATACTTAAGAAGTGTCAAGGATTGCCTCTATCCTTGAAAACAATTGGAAGTCTTTTATACACAAAACCATCTTTGGTGGAATGGGAAAGTATATTGGGAAGCGAGATATGGGACTTACCAGAAGAGGAGAGCAACATCATCCCCGCTTTAATTTTGAGTTATTATCACCTTCCTTCTCATTTGAAGAGATGTTTTGCTTATTGTGCCTTATTCCCTAAAAATTATGTGTTTCAAAAGGAGCACTTAATTTTATTATGGATGAGTGAGAATTTTCTGCAATGCCCTCGACAGAATATAAGTATGGAAGAAGTTGGTGAACAATACTTCAACGATCTATTTTCCAG 1058 0.3828 MQEVLENLEYLASKKDILGLKEASSTSGNHVYQKLPSTSLPVDSVIYGRDFDKEVICDWLISDAENVNHHLSIVSIVGMGGIGKTTLAQHLYNDPKMEDTFDIKAWVCVSEEFDVLELTRVIVEAITGTRNNTKVLDLLQVKLKETLSGKRFLLVLDDLWNEKRDQWEALQIPFNYGAPGSKILVTTRSLKVASTTRSTKIHQLEELAEEHCWKLFCKHAFLDENPQMNPDFKDIAKRILKKCQGLPLSLKTIGSLLYTKPSLVEWESILGSEIWDLPEEESNIIPALILSYYHLPSHLKRCFAYCALFPKNYVFQKEHLILLWMSENFLQCPRQNISMEEVGEQYFNDLFS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17306g00001 352 Pfam NB-ARC domain 66 270 IPR002182 GO:0043531
Trme17306g00001 352 PRINTS Disease resistance protein signature 146 160 - -
Trme17306g00001 352 PRINTS Disease resistance protein signature 73 88 - -
Trme17306g00001 352 PRINTS Disease resistance protein signature 243 257 - -
Trme17306g00001 352 Gene3D - 291 352 IPR036388 -
Trme17306g00001 352 PANTHER DISEASE RESISTANCE PROTEIN RP 37 352 IPR044974 GO:0006952
Trme17306g00001 352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 306 IPR027417 -
Trme17306g00001 352 FunFam Probable disease resistance protein At1g61300 31 200 - -
Trme17306g00001 352 Gene3D - 27 203 IPR027417 -
Trme17306g00001 352 Gene3D - 206 290 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17306g00001 Trme-Chr17306 331 1388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17306g00001 71 267 WRKY Transcription Factor Family AT5G45050 27.228 3.89e-12 65.9