Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17305g00001 GCCAAAAAAGATGACGGACCTTTGCTCGTATTAACCTCGGGCGATTATCCTGGAGGTACACCGAGGGTTGTTCGATTGGGAAGTATTAATAATAAAGAAGAATGTGATATTAACAAAGGATGTCCTTTTAACAAAGGAAGGAATACATCTAATGTTAGAAATTTGTCCATGAAGGCCGAAAATAATAACAATTCTTCACTAGTCGAAAAAATAACTACAGCAACAGCAGCAACAACAACAACAACAACAACAGCAACAGAAGATATGAGACAACAAGTAACAGAAACTTCTTCTGAAAAACCAGCCCCTTCATCTCCTGGTCCTCTTCCGCCGCCTCCTGGTCCTCTTCCGCCGCCTCCTGGTCCTTTGCCGACTCCTGGTCTTCCGACACCTCCTCCACCACAGCCACCTCCTCTTGCTCCTCGTCCTCCACCACCTCCAAAAGGTGGTCATCCACCACCTGCTCCTCCCAAACCAATGGCTGGTAAAAACAAAGGTATACCTCTTGCACCAGCAAAAGAAGGAAGTTCTAATGAAGGTGATGCTCAAAAGCCTAAACTAAAGCCATTTTTCTGGGAGAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAACGCAGGGTCGTTTGTGTAA 645 0.4496 AKKDDGPLLVLTSGDYPGGTPRVVRLGSINNKEECDINKGCPFNKGRNTSNVRNLSMKAENNNNSSLVEKITTATAATTTTTTTATEDMRQQVTETSSEKPAPSSPGPLPPPPGPLPPPPGPLPTPGLPTPPPPQPPPLAPRPPPPPKGGHPPPAPPKPMAGKNKGIPLAPAKEGSSNEGDAQKPKLKPFFWEKVNAKPDQSMVWHEINAGSFV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17305g00001 214 PANTHER FORMIN-RELATED 57 213 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme17305g00001 214 MobiDBLite consensus disorder prediction 103 161 - -
Trme17305g00001 214 PRINTS Proline rich extensin signature 91 103 - -
Trme17305g00001 214 PRINTS Proline rich extensin signature 147 168 - -
Trme17305g00001 214 PRINTS Proline rich extensin signature 134 146 - -
Trme17305g00001 214 PRINTS Proline rich extensin signature 110 126 - -
Trme17305g00001 214 MobiDBLite consensus disorder prediction 74 187 - -
Trme17305g00001 214 MobiDBLite consensus disorder prediction 74 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17305g00001 Trme-Chr17305 114 963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17305g00001 173 213 FH2 protein (formin) Gene Family AT4G15200 54.000 2.17e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17305g00001 - - vvo:131606706 111.309