Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme173004g00001 GTTGTAAAAGGAAAAGTTAAAGGTTATGGACTTCCAGCTGATATATGGAGTCTAGGATGCACTGTGTTGGAGATGTTAACTGGGAGACTTCCATACGCTCCTTTGGAATGTGTATGTCTCATATTACCATTTCAAGCTCATAATGCAACTAAGTTTCTTCTTTTCAAAGTTGTTAAATAA 180 0.3611 VVKGKVKGYGLPADIWSLGCTVLEMLTGRLPYAPLECVCLILPFQAHNATKFLLFKVVK 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme173004g00001 59 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 6 41 - -
Trme173004g00001 59 SUPERFAMILY Protein kinase-like (PK-like) 8 36 IPR011009 -
Trme173004g00001 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme173004g00001 59 Gene3D Transferase(Phosphotransferase) domain 1 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme173004g00001 Trme-Chr173004 275 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme173004g00001 8 38 MAP Kinase Kinase Kinase AT4G08500 77.419 2.59e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme173004g00001 K13414 - mtr:11436045 72.7886