Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme172g00001 | ATGTATTGGGCGTTTAACATAAATCAGTTGATAGAGACATTACATGTACCAGCATATATATCAGCTCAGCTCCTGGGAGCTACACTTGCTAGTGGAACTCTAAAACTAATTTTCAGTGGCAAACATGATCAGTTTTCAGGAAATCTTGCAACTGGGTCTAATCTTCAAGCTTTTGTACTTGAATTCATAGTCACATTTTTCCTTATGTTTACTATTTCTGGAGTTGCCACTGATAATAGAGCGATTGGTGAATTGGCTGGAATTGCAATTGGGTCTACATTATTGGTTAATGTGCTCATTTCAGGACCGATAACAGGAGCTTCGATGAACCCAGTTAGAAGCCTAGGACCTGCTTTTGTACACAATGAATACAGAGGAATATGGATATTTATATTGTCACCAATTTTGGGGGCCGTGGCCGGAGCATGGGTTTATAACACTGTTAGATACACCAACAAGTCAGTTCGTGAGATCACCAAGAGTGCTTCCTTCCTCAAAGAAGCGGGACGTGGTGGGCGCCAAACAGTTTAA | 531 | 0.4105 | MYWAFNINQLIETLHVPAYISAQLLGATLASGTLKLIFSGKHDQFSGNLATGSNLQAFVLEFIVTFFLMFTISGVATDNRAIGELAGIAIGSTLLVNVLISGPITGASMNPVRSLGPAFVHNEYRGIWIFILSPILGAVAGAWVYNTVRYTNKSVREITKSASFLKEAGRGGRQTV | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme172g00001 | 176 | PANTHER | AQUAPORIN NIP2-1 | 4 | 165 | IPR034294 | - | |
Trme172g00001 | 176 | Pfam | Major intrinsic protein | 6 | 145 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trme172g00001 | 176 | SUPERFAMILY | Aquaporin-like | 5 | 158 | IPR023271 | - | |
Trme172g00001 | 176 | PRINTS | Major intrinsic protein family signature | 15 | 34 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trme172g00001 | 176 | PRINTS | Major intrinsic protein family signature | 60 | 78 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trme172g00001 | 176 | PRINTS | Major intrinsic protein family signature | 128 | 148 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trme172g00001 | 176 | PRINTS | Major intrinsic protein family signature | 91 | 113 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trme172g00001 | 176 | Gene3D | Glycerol uptake facilitator protein. | 2 | 162 | IPR023271 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme172g00001 | Trme-Chr172 | 3662 | 4622 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme172g00001 | 15 | 166 | Major Intrinsic Protein MIP | AT5G37810 | 56.579 | 1.79e-58 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme172g00001 | K09874 | - | gmx:100813448 | 256.529 |