Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1727g00001 CTCAGGGATGAAAAAATTAAGGTTCTTACCCCAAAAGAAGCTGGTTATGCAGTACAGCTTTCGAACAAGGCCCTTCTTGATGTTCGCCCCTCAAATGAACACAACAAGGCATGGGTGAAAGGTTCAACCTGGATTCCAATATTCGATGTTGATAATGGACTAGATGTTGGAACCATTCCCAGAAAAGTTACAAATTTCGCTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCTTTTGACAACTCGTTCTTACCCAAAGTTGTGGAGAAGTTCCCCAAAGATGCAGAATTAATCGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCTTGTGAACTACTGTATAATGCTGGCTACAGTAACCTGTTCTGGGTTCAAGGAGGCTTCGAGGCTGCTGAAGAAGAGGCATGTTTTCCCATTCAATTTTCTGAAATTTCTATGGATCTTGTAGTTGAGGGTCCAGTGCCTCTTAAGTTTGCTGGAATTGGCGGCATCTCAGAATTCCTAGGGTAA 516 0.4419 LRDEKIKVLTPKEAGYAVQLSNKALLDVRPSNEHNKAWVKGSTWIPIFDVDNGLDVGTIPRKVTNFAMGGWWSGMPTLSFDNSFLPKVVEKFPKDAELIVACQKGLRSLAACELLYNAGYSNLFWVQGGFEAAEEEACFPIQFSEISMDLVVEGPVPLKFAGIGGISEFLG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1727g00001 171 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 6 132 IPR036873 -
Trme1727g00001 171 Gene3D - 6 146 IPR036873 -
Trme1727g00001 171 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 2 171 IPR044664 -
Trme1727g00001 171 Pfam Rhodanese-like domain 17 132 IPR001763 -
Trme1727g00001 171 SMART rhod_4 9 139 IPR001763 -
Trme1727g00001 171 CDD RHOD 25 132 - -
Trme1727g00001 171 ProSiteProfiles Rhodanese domain profile. 19 135 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1727g00001 1 171 Sulfurtransferasese or Rhodanese AT4G24750 71.345 2.63e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1727g00001 - - vvo:131656045 298.901