Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172784g00001 GAATTTCCAACTGATGCTGGTGTCATCCCAAGAGCTGTGAAGCAGATTTTTGATATATTAGAAGCTCAGAGTGCTGAATACAGTATGAAAGTAACATTTTTGGAGCTTTACAATGAGGAAATAACTGATCTTTTGGCCCCTGAGGAGACTACAAAATTTGTAGATGAAAAGTCTAAGAAACCTATCGCTTTAATGGAAGATGGGAAAGGGGGTGTTCTTGTTAGAGGATTAGAAGAAGAGATCGTTTGCACTGCAACTGAAATTTACAAGATATTGGAAAAAGGTTCTGCAAAAAGGCGTACTGCCGAGACTCTTCTGAACAAACAGAGTAGCCGTTCTCACTCCATATTTTCTATCACAATTCATATCAAGGAATGTACTCCGGAAGGTGAAGAAATGATTAAATGTGGAAAGCTAAATCTTGTGGACCTTGCGGGATCTGAGAACATTTCGCGTTCTGGTGCAAGAGAG 471 0.397 EFPTDAGVIPRAVKQIFDILEAQSAEYSMKVTFLELYNEEITDLLAPEETTKFVDEKSKKPIALMEDGKGGVLVRGLEEEIVCTATEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGARE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172784g00001 157 ProSiteProfiles Kinesin motor domain profile. 1 157 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme172784g00001 157 PANTHER KINESIN-LIKE PROTEIN KIF11 2 157 IPR047149 -
Trme172784g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 155 IPR027417 -
Trme172784g00001 157 ProSitePatterns Kinesin motor domain signature. 137 148 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trme172784g00001 157 Gene3D Kinesin motor domain 2 157 IPR036961 -
Trme172784g00001 157 SMART kinesin_4 1 157 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme172784g00001 157 PRINTS Kinesin heavy chain signature 138 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme172784g00001 157 PRINTS Kinesin heavy chain signature 104 121 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme172784g00001 157 Pfam Kinesin motor domain 5 155 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme172784g00001 Trme-Chr172784 1 471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172784g00001 4 155 Calmodulin-binding Proteins AT5G65930 35.065 3.50e-22 90.1