Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17273g00001 AGAAGGCTTTCATTAGGGGAATATAAGAGAGCAGTTTCATGGTCTAAGTATGTAGTTTCTTCTGGAGCAGCTATAAAGGGAAATGAAGAAGATGATTGGAATGCTGATATGTCTCAGTTATTCATTGGTTCCAAATTTGATTCTGGGAGACATAGCAGGATCTATAGAGGTATCTATAAGAATTTGGATGTGGCTATTAAGCTTGTTAGTCAACCTGAGGAGGATGAACAATTGGCTGCTTTGCTTGAGAAACAYTTCACTTCTGAAGTTGCTTTGTTGTTTCRGTTGCGCCATCCGAATATCATTACTGCAAATGCGGCCGTAGGGCCACAATTGTGGCTACATACTGCAATTTAG 357 0.3978 RRLSLGEYKRAVSWSKYVVSSGAAIKGNEEDDWNADMSQLFIGSKFDSGRHSRIYRGIYKNLDVAIKLVSQPEEDEQLAALLEKHFTSEVALLFXLRHPNIITANAAVGPQLWLHTAI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17273g00001 118 Gene3D Phosphorylase Kinase; domain 1 26 117 - -
Trme17273g00001 118 ProSiteProfiles Protein kinase domain profile. 40 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme17273g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 30 103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17273g00001 Trme-Chr17273 432 918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17273g00001 13 107 MAP Kinase Kinase Kinase AT1G62400 54.545 9.57e-26 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme17273g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17273g00001 - - gmx:100785212 181.415