Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17263g00001 ATGAAGGGATTAGTATTGCCGCCAACTTACAAAATAGGGAATGATGCTGAGCTACTTGAAGAAATCATCAATGTTGTGTTGAAGACGTTGAGTAACCACACTATTATCACAAAAGGACTTATTGGAATTGGTAAACCAATTGCACATTTAGAATCATTATTACGTCAAGAGTCAGAAAAGGTAAGTGAAGAATTCGGACGGCATGGAATAACTTTTTTAAAAGAAAAGCTTTTCTCTACACTATTAGCAGAAGATGTGAAAATCAATTCACCAAATTGGCTGTCTGATTATATTGAGAGAAGGATTGGCCGTATAAAGKTTCTTATTGTTCTTGATGATGTTAAGGAAGAAGGCCAACTAGAGATGTTATTTGGAACTCTTGATTGGTTTCGATCCGATAGTAGAATAATTGTAACAACTAGAGATAAGCAAGTACTCATTGCTAATCATGAAGTTGATGATATATTCGAAGTTGGGGTATTGGATTCTAGTGAAGCACTCGAGCTTTTCAATTTGAATGCCTTTAAACAACGTCATCTTGAAATGGAATATTATGATATATCAAAGAGGGTGGTCAATTATGCTAAAGGAATTCCATTAGTTCTTAAAGTTTTGGCTCATCTGCTTTGTGGAAAAGATAAGGRAGTATGGGAAAGTCAGCTAGATAAACTTAAAAGACTGCCAATKRAWAAAGTTTATGATGTAATGAGACTCRGTTATGATGATCTTGATCGTTTAGAGMAAAARTAYTTTTTAGATATTGCTTGTTTCTTCAATGGGTTGAGTTTGAAAGTGGATTACATGAAACTTTTATTGAAAGATTGTGAAAGTGACAATTCAGTGGTTGTTGGGTTAGAAAGATTGAAAGACAAAGCTCTTATAACTATTTCTGAAGATAATGTAGTATCCATGCATGATATTATACAAGAAATGGGTAGGGAGGTTGTTCGCCAAGAATCTA 961 0.3361 MKGLVLPPTYKIGNDAELLEEIINVVLKTLSNHTIITKGLIGIGKPIAHLESLLRQESEKVSEEFGRHGITFLKEKLFSTLLAEDVKINSPNWLSDYIERRIGRIKXLIVLDDVKEEGQLEMLFGTLDWFRSDSRIIVTTRDKQVLIANHEVDDIFEVGVLDSSEALELFNLNAFKQRHLEMEYYDISKRVVNYAKGIPLVLKVLAHLLCGKDKXVWESQLDKLKRLPXXKVYDVMRLXYDDLDRLEXKYFLDIACFFNGLSLKVDYMKLLLKDCESDNSVVVGLERLKDKALITISEDNVVSMHDIIQEMGREVVRQES 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17263g00001 320 Pfam NB-ARC domain 61 226 IPR002182 GO:0043531
Trme17263g00001 320 SUPERFAMILY "Winged helix" DNA-binding domain 231 320 IPR036390 -
Trme17263g00001 320 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 317 IPR044974 GO:0006952
Trme17263g00001 320 PRINTS Disease resistance protein signature 34 49 - -
Trme17263g00001 320 PRINTS Disease resistance protein signature 101 115 - -
Trme17263g00001 320 PRINTS Disease resistance protein signature 195 209 - -
Trme17263g00001 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 254 IPR027417 -
Trme17263g00001 320 Gene3D - 160 244 IPR042197 -
Trme17263g00001 320 Gene3D - 4 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17263g00001 Trme-Chr17263 1 1160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17263g00001 39 320 WRKY Transcription Factor Family AT5G45050 34.459 3.87e-36 136