Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172619g00001 TGTTATATATTAAAAAAGGCTGAGAAAAGGAAGCAGAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCGGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCGAAAGAATCTATGGAGCTCCTTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAAGGGGCTGTCCTCTATTATCCAAATTGATCTTGATACCTTGCAAAACCTTGAATCATTTAGGGGTGAGCAATTTCTCATTATTTTCCTTAGTGATATTGCATAA 282 0.4043 CYILKKAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESMELLEDEQLELMELAAASKGLSSIIQIDLDTLQNLESFRGEQFLIIFLSDIA 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172619g00001 93 Coils Coil 4 37 - -
Trme172619g00001 93 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 5 82 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme172619g00001 Trme-Chr172619 3 284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172619g00001 6 80 Homeobox Transcription Factor Family AT1G28420 74.667 6.51e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172619g00001 - - gmx:100777465 81.2629