Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172505g00001 GATGTAGTCAACTACGAGGAGTTTTCAAGAAACTTGACAAATGAAGAACAGCAGCAATTACTGAAATATCTCCCTGTGGTTGATACTGCTAAACTTCCTGATAGCCTTAAAATTATGTTCGATAGCTTTCAATTCAAGGAGGATTTAACCTATTTTCAGAAACTTCTCGGGGAAGGTGTCCTCGATATCTCTTTATTGGGGGCAAACCCTGAAGACTGCAAGACGTTGAAAAGGCTTGCAT 241 0.3983 DVVNYEEFSRNLTNEEQQQLLKYLPVVDTAKLPDSLKIMFDSFQFKEDLTYFQKLLGEGVLDISLLGANPEDCKTLKRLA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172505g00001 80 Gene3D - 1 79 IPR038108 -
Trme172505g00001 80 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 1 80 IPR044867 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172505g00001 1 80 C2C2-Gata Transcription Factor Family AT5G47140 52.500 5.62e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172505g00001 - - gmx:100799745 136.732