Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172489g00001 ATGCATCAGTACCATCTAGGGACTGATGAAGATGAGAAGAATGGAGAATATGTGGTTTCAAAAATATTTTATAAACAGATTGAGAAAATCGAGGAGAAACCAATGGCTGAAGAACATGATGACAATATAACATTGCGAACAAATCCAAGGACTCCAAAACCAAATCCTCCAAATCCACCGCGCACAGGAAAATGTGTTGAAAATGATGATAACATTGATGAAACTACACTTTTGTCATTTGCAGAGGATGCCAAGTCGGTCGCTGTAGAATCACGTGCCCCTCAATCTGGTATTCAGGATCACGGCAATGCAGAAAACTCGGCATGGTTGGCTGGTGTATCACAGGCTT 349 0.4126 MHQYHLGTDEDEKNGEYVVSKIFYKQIEKIEEKPMAEEHDDNITLRTNPRTPKPNPPNPPRTGKCVENDDNIDETTLLSFAEDAKSVAVESRAPQSGIQDHGNAENSAWLAGVSQA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172489g00001 116 MobiDBLite consensus disorder prediction 92 116 - -
Trme172489g00001 116 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 87 IPR044799 GO:0003700
Trme172489g00001 116 MobiDBLite consensus disorder prediction 88 116 - -
Trme172489g00001 116 MobiDBLite consensus disorder prediction 33 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme172489g00001 Trme-Chr172489 10 494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172489g00001 1 34 NAC Transcription Factor Family AT1G28470 57.895 1.11e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172489g00001 - - mtr:25497909 153.68