Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172273g00001 GTATATAGTGAAGTACTAAGTCCAAGACCTTCACCATTAAGTCCAAGGTTAGTTTCAAGTCCAAGACCTTCACCATTAAGTCCAAGAAAACCACCTCTAAGTCCTAGACTAAACCTACCAATTAGTCCAAGAACCCCACAACCAAGTAGCCCTTACAAGCCAAGATTACAACAAAGTTACATTGCACTTTCACCTCTTGATCCATCTCCTACTACTTCCTCTGCTTCCTCAGTCAATGATAATATCAATGAGCTTGTTGCTAATTCAAAGTCACCTATTGCTGATGTGGAGGTCAAGTTTTCAGGTCCTCATGTTCTTTTGAAAACTGTTTCTCAAAGAATTCCAGGCCAAGCTTTGAAGATTATATCTGCACTTGAAGATCTTGCACTTGAAATTCTTCATGTTAACATTAATAGTAGTTCTGATGATACCATGATGAACTCCTTCACTATCAAGGTATGTTTATTATTGGAATATTGA 480 0.3771 VYSEVLSPRPSPLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPSSPYKPRLQQSYIALSPLDPSPTTSSASSVNDNINELVANSKSPIADVEVKFSGPHVLLKTVSQRIPGQALKIISALEDLALEILHVNINSSSDDTMMNSFTIKVCLLLEY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172273g00001 159 MobiDBLite consensus disorder prediction 51 77 - -
Trme172273g00001 159 MobiDBLite consensus disorder prediction 1 77 - -
Trme172273g00001 159 MobiDBLite consensus disorder prediction 14 50 - -
Trme172273g00001 159 PANTHER TRANSCRIPTION FACTOR FAMA 20 155 IPR044283 GO:0003700|GO:0010052
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172273g00001 29 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 53.416 9.13e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172273g00001 K20558 - gmx:100808130 192.971