Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17209g00001 ATGTGTAGCCAAAACAACAGTTATTTGGAAATTCCAGTCCATTTGATGATTTTGGATTTACTCTTTTTTCATAGGCATATCAAGTTTGCAATTAAACCATTGTCTGCTACCACTGCAGCAGAGGCTGAATTACCCCCCACCCATCCCATTCGATTGGGTCTGGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCACCAGAAAGAGCCTGCCATCTTGCAAAGCAGGCTTTTGATGAAGCGATTTCAGAGCTTGACACCTTGAATGAGGAGTCCTACAAAGATAGTACCTTGATCATGCAACTTCTGAGGGACAATCTGACTCTCTGGACTTCTGACATCCCAGATGATGGAG 361 0.4183 MCSQNNSYLEIPVHLMILDLLFFHRHIKFAIKPLSATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPDDG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17209g00001 120 Coils Coil 73 93 - -
Trme17209g00001 120 Pfam 14-3-3 protein 35 113 IPR023410 -
Trme17209g00001 120 SUPERFAMILY 14-3-3 protein 36 119 IPR036815 -
Trme17209g00001 120 PANTHER 14-3-3 PROTEIN 35 116 IPR000308 -
Trme17209g00001 120 ProSitePatterns 14-3-3 proteins signature 2. 95 114 IPR023409 -
Trme17209g00001 120 SMART 1433_4 1 120 IPR023410 -
Trme17209g00001 120 PRINTS 14-3-3 protein zeta signature 32 58 IPR000308 -
Trme17209g00001 120 PRINTS 14-3-3 protein zeta signature 59 85 IPR000308 -
Trme17209g00001 120 PRINTS 14-3-3 protein zeta signature 86 115 IPR000308 -
Trme17209g00001 120 Gene3D - 23 120 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17209g00001 Trme-Chr17209 83 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17209g00001 36 120 14-3-3 family AT2G42590 92.941 4.09e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17209g00001 K06630 - gmx:547990 168.703