Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172071g00001 GCAAATGCTGAGGACTCAGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAGCAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTACAGCTATAGCAAGATACTCAAGGATCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAG 192 0.4531 ANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVEDPELGQ 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172071g00001 64 CDD eIF1_SUI1 12 64 IPR005874 GO:0003743
Trme172071g00001 64 SUPERFAMILY eIF1-like 8 63 IPR036877 GO:0003743|GO:0006413
Trme172071g00001 64 ProSiteProfiles Translation initiation factor SUI1 family profile. 14 64 IPR001950 GO:0003743|GO:0006413
Trme172071g00001 64 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 64 - -
Trme172071g00001 64 Gene3D - 1 64 - -
Trme172071g00001 64 Pfam Translation initiation factor SUI1 11 61 IPR001950 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172071g00001 1 64 Eukaryotic Initiation Factors Gene Family AT1G54290 95.312 1.74e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172071g00001 K03113 - gmx:100788156 131.724