Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme172003g00001 ATGATGTTGTGGCCATTCAAGGTCGTTGCGGGTGTGAATGAAAAACCTATGATTACCCTTAAGTACAAGGGTGAAGAAAAGCAATTTTGTGCCGAGGAAATATCATCTATGATTCTTATAAAGATGAAAGAGATTGCCGAGGCATATTTGGAGTCTCCTGTAAAAWMTGCCGTTGTTACTGTGCCGGCTTATTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTTCTATTGCTGGCCTTAATGTCATCCGGATAATCAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAAGTGATGGTAAACGAAATATTTTTGTCTTTGATCTTGGTGGTGGTACTTTTGATGTATCTATTCTCACTATTAAGGGTGATGTCTTTGAAGTAAAAGCCACTGCTGGAAACACTCACCTTGG 431 0.4037 MMLWPFKVVAGVNEKPMITLKYKGEEKQFCAEEISSMILIKMKEIAEAYLESPVKXAVVTVPAYFNDSQRKATIDAGSIAGLNVIRIINEPTAAAIAYGLDKRSDGKRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme172003g00001 144 Pfam Hsp70 protein 3 144 IPR013126 GO:0005524|GO:0140662
Trme172003g00001 144 PANTHER HEAT SHOCK PROTEIN 70KDA 1 144 IPR013126 GO:0005524|GO:0140662
Trme172003g00001 144 SUPERFAMILY Actin-like ATPase domain 106 144 IPR043129 -
Trme172003g00001 144 FunFam Endoplasmic reticulum chaperone BiP 8 113 - -
Trme172003g00001 144 ProSitePatterns Heat shock hsp70 proteins family signature 2. 112 125 IPR018181 -
Trme172003g00001 144 Gene3D - 103 143 - -
Trme172003g00001 144 Gene3D - 3 37 - -
Trme172003g00001 144 PRINTS 70kDa heat shock protein signature 118 128 - -
Trme172003g00001 144 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme172003g00001 144 FunFam Heat shock protein ssb1 1 37 - -
Trme172003g00001 144 Gene3D - 38 102 - -
Trme172003g00001 144 SUPERFAMILY Actin-like ATPase domain 2 102 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme172003g00001 Trme-Chr172003 65 495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme172003g00001 4 144 Calmodulin-binding Proteins AT3G12580 76.224 1.24e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme172003g00001 K03283 - vvo:131625172 243.047