Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme171993g00001 GGAACACAAGTGTTTGTGAATGCATGGGCAATTGGAAGAGACCAAAAGTACTGGATTGAAGGAGAAAAGTTTTATCCAGAGAGGTTTCTGGATTGTCCAATTGATTACAAAGGGTCCAATTTTGAGTTCATACCTTTTGGTGCTGGAAGGAGAATGTGTCCTGGAATATCTTTTGCTGTACCTAATATAGAACTTGCTCTTGCACAATTGTTATACTATTTTGATTGGGAGTTTCCAATTGGAATAAGTCATGAAAATTTTGACATGACTGAAGCCTTTGGTGTTACGGTGAAAAGGAAAAATGAGCTAATTGTAATTCCATTTCCTTACAATCCTTGA 339 0.3687 GTQVFVNAWAIGRDQKYWIEGEKFYPERFLDCPIDYKGSNFEFIPFGAGRRMCPGISFAVPNIELALAQLLYYFDWEFPIGISHENFDMTEAFGVTVKRKNELIVIPFPYNP 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme171993g00001 112 PRINTS E-class P450 group I signature 43 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 PRINTS E-class P450 group I signature 53 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 PRINTS E-class P450 group I signature 7 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 46 55 IPR017972 GO:0005506|GO:0016705
Trme171993g00001 112 SUPERFAMILY Cytochrome P450 1 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 Pfam Cytochrome P450 1 99 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 Gene3D Cytochrome P450 1 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme171993g00001 112 PANTHER OS08G0105600 PROTEIN 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme171993g00001 Trme-Chr171993 121 459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme171993g00001 2 107 Cytochrome P450 AT3G26230 53.774 2.54e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme171993g00001 - - lja:Lj0g3v0171809.1 199.904