Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme171991g00001 ATGCAGGTATATGATGTGACAAAATATTTGGATGATCATCCTGGTGGAGATGATGTTATCCTCGAAGCAACAGGGAGAGATGCAACTGAGGATTTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAGCAATATTATATTGGTGAGTTTGACACGTCGTCTCCGATTGCTACCAAGAAAG 190 0.4211 MQVYDVTKYLDDHPGGDDVILEATGRDATEDFEDAGHSKSARELMEQYYIGEFDTSSPIATKK 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme171991g00001 63 Gene3D - 1 57 IPR036400 -
Trme171991g00001 63 PRINTS Cytochrome B5 signature 3 13 IPR001199 -
Trme171991g00001 63 PRINTS Cytochrome B5 signature 28 35 IPR001199 -
Trme171991g00001 63 PRINTS Cytochrome B5 signature 41 53 IPR001199 -
Trme171991g00001 63 PRINTS Cytochrome B5 signature 13 27 IPR001199 -
Trme171991g00001 63 SMART Cyt_b5_2 1 54 IPR001199 -
Trme171991g00001 63 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 9 16 IPR018506 GO:0020037
Trme171991g00001 63 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 54 IPR001199 -
Trme171991g00001 63 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 59 IPR036400 -
Trme171991g00001 63 PANTHER CYTOCHROME B5 2 58 - -
Trme171991g00001 63 Pfam Cytochrome b5-like Heme/Steroid binding domain 2 53 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme171991g00001 Trme-Chr171991 19 330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme171991g00001 1 57 NADPH P450 reductases AT2G32720 70.175 8.20e-28 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme171991g00001 K23490 - gmx:100500537 110.923