Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17119g00001 ATGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCGTTATCTGACACAGACCCCTGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTGCTCAAAGATTGTCCTAGGTTGTCTAAGGTTTCCCATAGCATTGGACATCTCAATAAAGTTCTTCTGATAAATTTGAAAGACTGCATTAGCCTTTATAACCTTCCTAGAAACATCTATACGTTGAAATCTTTGAAAACTCTCATTCTATCTGGATGTTTAATGATTGACAAATTGGACGAGGACTTTGAACAGATGGAATCTTTAACCACTCTGATGGCAGATAACACAGCTATAACAGAAGTGCCTTTTTCAGTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGATATGAAGGATCCTCACGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAATAAATAATCTCTCACTCCCTGTTCAAACAGTTGCTGGCATGTCATCCCTTGTTTCATTAG 508 0.372 MMEKLKILNLSHSRYLTQTPDFSYLPNLEKLVLKDCPRLSKVSHSIGHLNKVLLINLKDCISLYNLPRNIYTLKSLKTLILSGCLMIDKLDEDFEQMESLTTLMADNTAITEVPFSVVRSKSIGYISLCGYEGSSRDVFPSIIWSWMSPINNLSLPVQTVAGMSSLVSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17119g00001 169 Gene3D Ribonuclease Inhibitor 1 169 IPR032675 -
Trme17119g00001 169 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 114 - -
Trme17119g00001 169 SUPERFAMILY L domain-like 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17119g00001 Trme-Chr17119 140 647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17119g00001 2 117 WRKY Transcription Factor Family AT4G12020 33.621 3.15e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17119g00001 - - lja:Lj3g3v1567740.2 280.796