Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170897g00001 ATGGATATGCACGGTGGTATGTCAATGGCACCAAAGTCATCAACCAATGGTACCATGATGATGGGTCGTCACAAGACGATGATGCATATGACATTCTTTTGGGGAAAAGATTCATTGATTCTCTTTGATGGTTTTCCTTCTCATAACACTGCTTATTATGTATTGGCACTTTACATGGTTTTCACCATGTCTATTCTCATTGAGTTCATCTCTCATACTCGCTTCATCAAACCTGATACCAACCCTATGGTGGCCAGTCTGCTTCAGACGCTTCTTCATGTTCTCATGATCGACCTAGCTTACTTGGTCATGTTGGCGCTCATGTCTTTCAACAGCGGAGTTTTCTTGGTTGCTGTCCTTGGCC 364 0.4313 MDMHGGMSMAPKSSTNGTMMMGRHKTMMHMTFFWGKDSLILFDGFPSHNTAYYVLALYMVFTMSILIEFISHTRFIKPDTNPMVASLLQTLLHVLMIDLAYLVMLALMSFNSGVFLVAVLG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170897g00001 121 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 19 121 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trme170897g00001 121 Pfam Ctr copper transporter family 79 121 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170897g00001 Trme-Chr170897 134 497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170897g00001 23 121 Inorganic Solute Cotransporters AT5G59040 45.455 2.15e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170897g00001 K14686 - gmx:100306175 149.443