Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170841g00001 GAAACTGATAAAGTTGAAGGCATACTATTTGATTTATCTCAAAAAGTGGAGTTACTGGTTCAAGTTGACACATTCACCAAGATGACAGAATTAAGATTTCTTAGATTAAATGTCCCCTTAGGTAAGACGAGATTGACTACTGTGTCTATTCCTAAAGATATCAAGCCATTTTCTGATAAATTGAGATATCTTGAGTGGAATGGATACCCGTTGAAGACTCTTCCGCAACCTTTTTGTGCTAAGCTGCTTGTTGAGATTCACCTACCACATAGTGATGTGGAACATCTTTGGCACGGGGTGCAGGTGAGTGCGTGTTCACATGGTGATGTGGAACATCTATGGGTTTCAATTTGA 354 0.3927 ETDKVEGILFDLSQKVELLVQVDTFTKMTELRFLRLNVPLGKTRLTTVSIPKDIKPFSDKLRYLEWNGYPLKTLPQPFCAKLLVEIHLPHSDVEHLWHGVQVSACSHGDVEHLWVSI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170841g00001 117 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 101 IPR044974 GO:0006952
Trme170841g00001 117 Pfam Leucine Rich Repeat 83 101 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170841g00001 Trme-Chr170841 75 428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170841g00001 2 106 WRKY Transcription Factor Family AT4G12020 34.286 1.64e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170841g00001 - - cam:101488696 170.629