Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170684g00001 TCATTTGTTGCTTTTACTGATGATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAACTTCCACCAACCCCGAAAACACCGTCTTTGATGCTAAGAGATTAATTGGTAGGAAATTTAGTGACCCTCTTGTTCAGAAAGATATAATGTTGTGGCCATTCAAGGTCGTTGCCGGTGTAAATGACAAACCTATGATTACCCTTAAGTATAAGGGTCAAGAGAAGCAATTTTGTGCTGAGGAAATATCATCTATGGTCCTTACAAAGATGCGAGAAGTTGCTGAGGCATATCTGCAGTCTCCCGTCAAGAATGCTGTTGTTACTGTGCCGGCTTACTTCAATGATGCACAGCGAAAAGCCACTATAGATGCTGGTGCCATTGCTGGCATTAATGTCATTC 397 0.4156 SFVAFTDDQRLIGDAAKNQTSTNPENTVFDAKRLIGRKFSDPLVQKDIMLWPFKVVAGVNDKPMITLKYKGQEKQFCAEEISSMVLTKMREVAEAYLQSPVKNAVVTVPAYFNDAQRKATIDAGAIAGINVI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170684g00001 132 Gene3D - 29 80 - -
Trme170684g00001 132 Gene3D - 1 132 - -
Trme170684g00001 132 PRINTS 70kDa heat shock protein signature 104 124 - -
Trme170684g00001 132 PRINTS 70kDa heat shock protein signature 16 24 - -
Trme170684g00001 132 Pfam Hsp70 protein 1 132 IPR013126 GO:0005524|GO:0140662
Trme170684g00001 132 PANTHER HEAT SHOCK PROTEIN 70KDA 1 131 IPR013126 GO:0005524|GO:0140662
Trme170684g00001 132 FunFam Heat shock 70 kDa protein 29 84 - -
Trme170684g00001 132 SUPERFAMILY Actin-like ATPase domain 1 132 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170684g00001 Trme-Chr170684 2 498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170684g00001 1 132 Calmodulin-binding Proteins AT5G02500 73.485 1.92e-65 205