Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170667g00001 ATGAAAAGGCTACACCGAAAGAAGGTTTTATTGATTCTCGATGACATTGACAAATTGAAGCAGCTGCATGCTTTGGCAGGAGGGCTTGATTGGTTTGGTGCTGGCAGTAGAGTGATCGTTACCACTCGTGACAAACACTTGCTAGAAAGTCATGGGATTGAAGTAAAATATGAAATAGATGAGTTTGATAAGGGAGAATCTCTTGAATTGCTTAAGTGGAAGGCTTTTGATG 232 0.4052 MKRLHRKKVLLILDDIDKLKQLHALAGGLDWFGAGSRVIVTTRDKHLLESHGIEVKYEIDEFDKGESLELLKWKAFD 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170667g00001 77 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 76 IPR044974 GO:0006952
Trme170667g00001 77 Pfam NB-ARC domain 3 76 IPR002182 GO:0043531
Trme170667g00001 77 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 76 IPR027417 -
Trme170667g00001 77 Gene3D - 1 57 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170667g00001 Trme-Chr170667 44 275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170667g00001 3 71 WRKY Transcription Factor Family AT4G12020 39.130 2.23e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170667g00001 - - tpra:123910163 108.227