Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170666g00001 ATGGATCCAGAGCCTGGTCGTTGCCGGAGAACCGACGGTAAAAAGTGGCGGTGTTCGAGGGATGTGGTGGTTGGACAGAAGTACTGTGAAAGACATATGCATCGTGGTAGAAACCGTTCAAGAAAGCCTGTGGAACTTCCCACACCAACTAGTGCCGGTGGTGGTGGTGGTGGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTCATTGAAATCTCCTTTTAATCTTCTTCATCTCAATGAACGGTAA 258 0.4147 MDPEPGRCRRTDGKKWRCSRDVVVGQKYCERHMHRGRNRSRKPVELPTPTSAGGGGGGXXXXXXXXXXXXXSLKSPFNLLHLNER 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170666g00001 85 Pfam WRC 3 45 IPR014977 -
Trme170666g00001 85 PANTHER GROWTH-REGULATING FACTOR 5 1 48 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trme170666g00001 85 MobiDBLite consensus disorder prediction 32 70 - -
Trme170666g00001 85 ProSiteProfiles WRC domain profile. 2 46 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170666g00001 Trme-Chr170666 62 319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170666g00001 1 52 GRF Transcription Factor Family AT2G36400 86.538 8.57e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170666g00001 - - gmx:100814842 129.028