Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17058g00001 ATGCGTAATGCTCAAGCTTGCTCTGCTGGAGGAAATGCATCCCCTGAAAAGTGTGATTGTATAGACAAAAATATGGTAAACGGTAAGCTTGTTTTATGCGGAGCAAGCGGAGGTGAAGGAACAGCTTATGCCAATGGTGCAATTGGTTCGATCATTAATAGTACACGCTCTAGTTTTGATAAAGCTTCTGTCACTGATAAGCCTTCACTTAACTTGGAAACAAAGGACTTTGTTCATGTTCAATCTTATACAAATTCCACTAAATACCCTGTAGCTGAAATTTTAAAGAGTGAGATCTTCCATGACACCAATGCTCCTAGAATCGCCTCTTTCTCTTCTCGTGGCCCAAATAATTTAGTTCTAGAAATTATGAAACCAGATGTAAATTGGTCACCTGCAGCTATCAAATCTGCCATCATGACCACCACAAAACCAGTGAAGAGTTATGATGATGATTTGGCAGGTGAGTTTGCTTATGGTTCTGGGAATATCAATCCACAACAGGCCATTCACCCAGGACTTGTTTATGACATCTCTAAGGAAGATTATGTCCAAATGCTTTGTAATTATGGGTATGATGCTAACAAAATTAAACAGATTAGTGGAGATAACTCAAGTTGCGATGGAGCTTCCAAAAGAGCCCTTGTTAAAGATATAAACTATCCAGCAATGGTGATTCCCGTTAGGCCTTATAACAAGAATTTCCATGTCAAGATTCATAGAACAGTCACAAATGTTGGTTTTCCAAACACAACCTACAAGGCTACTCTCATCCATCATAATCCAAAAATCAAGATTATG 801 0.387 MRNAQACSAGGNASPEKCDCIDKNMVNGKLVLCGASGGEGTAYANGAIGSIINSTRSSFDKASVTDKPSLNLETKDFVHVQSYTNSTKYPVAEILKSEIFHDTNAPRIASFSSRGPNNLVLEIMKPDVNWSPAAIKSAIMTTTKPVKSYDDDLAGEFAYGSGNINPQQAIHPGLVYDISKEDYVQMLCNYGYDANKIKQISGDNSSCDGASKRALVKDINYPAMVIPVRPYNKNFHVKIHRTVTNVGFPNTTYKATLIHHNPKIKIM 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17058g00001 267 Gene3D Peptidase S8/S53 domain 129 183 IPR036852 GO:0004252|GO:0006508
Trme17058g00001 267 Gene3D Peptidase S8/S53 domain 102 128 IPR036852 GO:0004252|GO:0006508
Trme17058g00001 267 Gene3D - 15 101 - -
Trme17058g00001 267 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 128 IPR045051 -
Trme17058g00001 267 Gene3D - 187 267 - -
Trme17058g00001 267 Pfam Fibronectin type-III domain 218 260 IPR041469 -
Trme17058g00001 267 SUPERFAMILY Subtilisin-like 100 256 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17058g00001 Trme-Chr17058 397 1344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17058g00001 11 267 Subtilisin-like Serine Gene Family AT3G46850 36.957 4.24e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17058g00001 - - mtr:11439741 250.366