Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170392g00001 ATGTTGTGTGACGATAGGCAGCATGACATGCAAAAAGCGGCTGCTTTTATAAAACGTTTGGCTACATTGTCACTGTGTGTTGGATCTGCAGATACCATGGCTGCCTTGGTCACAGTAAAGCATCTCCTTCTGAAGAATGTCAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGTTCTGTTTCTGGCACAATTCCG 201 0.4527 MLCDDRQHDMQKAAAFIKRLATLSLCVGSADTMAALVTVKHLLLKNVKCRNLLENDTGGGSVSGTIP 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170392g00001 67 Pfam CBF/Mak21 family 8 54 IPR005612 -
Trme170392g00001 67 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 1 60 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170392g00001 Trme-Chr170392 140 473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170392g00001 1 66 Core DNA Replication Machinery Family AT1G79150 77.273 5.89e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170392g00001 K14834 - gmx:100794797 124.405