Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170229g00001 ATGTCAGAGACTAACGACTGCGCCGCCACCGTCACCGCCGGTGGTGGTTACCGGAGTACATTTTCAAGGTCAGTTTCATGGACTGACCGTTCACCTTCAAACAGAAAACCACCTCATGCGGCGGCGAAAAACAGACAGCTTCGACCCCTTTCCATCAACAAACGTAGCATTGAAGAATGGCCAAGTGCTGGATCTGACGATCTTGGAGTTTGGCCACAAGCAGATACACCAAGAGGAAGAGGTTCAATCACTGGTTCTGAGTTTCAGTTCAAAAGAGACAAGTTAGCTTTTTATGACAAAGAATGTTCTAGAATTGCTGAACATGTGTAC 330 0.4697 MSETNDCAATVTAGGGYRSTFSRSVSWTDRSPSNRKPPHAAAKNRQLRPLSINKRSIEEWPSAGSDDLGVWPQADTPRGRGSITGSEFQFKRDKLAFYDKECSRIAEHVY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170229g00001 110 PANTHER MKPA PROTEIN 17 110 - -
Trme170229g00001 110 MobiDBLite consensus disorder prediction 1 85 - -
Trme170229g00001 110 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170229g00001 Trme-Chr170229 170 499 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170229g00001 1 110 Protein tyrosine phosphatase (PTP) family AT3G55270 31.875 7.90e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170229g00001 - - tpra:123917031 227.639