Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17018g00001 ATGGCACCAGAAGTTCTTCGTAACGAACCGTCAGATGAGAAGTCTGATGTATACAGCTTTGGGGTGATATTATGGGAACTTGCGACCGAAAAGATTCCTTGGGATAATCTCAACGCAATGCAGGTAATTGGAGCTGTAGGGTTTATGAATCAGCGTCCGGAAATTCCAAAAGATGTTGATCCAGGGTGGGCTTCTTTAATTGAGATCTGCTGGCACAGTGATCCAACTTGCCGACCAACTTTCCCGGAACTGCTCGAAAGGCTTAAAGAGTTGCAAAAACAGTATGTCATTCAGTTCCAGGCCGCCCGGTCTGCTGGCGGGGAAAGCACCCAAAGAAAGGAGTCCTAG 348 0.477 MAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNAMQVIGAVGFMNQRPEIPKDVDPGWASLIEICWHSDPTCRPTFPELLERLKELQKQYVIQFQAARSAGGESTQRKES 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17018g00001 115 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme17018g00001 115 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 96 - -
Trme17018g00001 115 Pfam Protein tyrosine and serine/threonine kinase 1 88 IPR001245 GO:0004672|GO:0006468
Trme17018g00001 115 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
Trme17018g00001 115 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17018g00001 Trme-Chr17018 106 955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17018g00001 1 105 MAP Kinase Kinase Kinase AT3G06640 77.143 4.62e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme17018g00001 PK_Tyr_Ser-Thr 7.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17018g00001 - - vvo:131642523 219.164