Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme170178g00001 GGAACGCCTGCTTTTGCTGCACAATTACCTCTTGCAGTTCTTTTTTCTCCGCTTTTCGTACTGCAAGGTGTTGGCGTGATATTATCCGCATCTAAATTTGTGGAGAAACTTGTGCTTCTTCTACGAAGTGGAGCTGGCGGAGGACTTTATTTTAGATTCTCTTCCAGAGCTCATGATTGCTTGGGATTTTTGCACCATGGTTCTAGGTAA 210 0.4381 GTPAFAAQLPLAVLFSPLFVLQGVGVILSASKFVEKLVLLLRSGAGGGLYFRFSSRAHDCLGFLHHGSR 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme170178g00001 69 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme170178g00001 Trme-Chr170178 139 348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme170178g00001 1 69 C3H Transcription Factor Family AT1G18470 71.014 6.12e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme170178g00001 - - tpra:123921257 133.265