Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme169951g00001 GAAGAAGCAAGGCTATCTCCGGAGGCCAAAGATCTTATAAGTAACCTTTTGTGTAATGTCAACCAGAGACTGGGGTCAAATGGTGCAACTGAAATAAAGTCTCATCCATTCTTTGAAGGTGTTCAATGGGAAAAGTTGTATCAAATGGAAGCAGCATTTATTCCTGAAGTCAATGACGAGTTAGATACTCAAAATTTTGAAAAATTTGAAGAGGTATTTGAATATTTCAGTCTGACAGCCAGACTCATTCATCATCAAGATCTGGTCCATGGAGAAAGGTAA 282 0.3794 EEARLSPEAKDLISNLLCNVNQRLGSNGATEIKSHPFFEGVQWEKLYQMEAAFIPEVNDELDTQNFEKFEEVFEYFSLTARLIHHQDLVHGER 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme169951g00001 93 Gene3D Transferase(Phosphotransferase) domain 1 3 58 - -
Trme169951g00001 93 FunFam Non-specific serine/threonine protein kinase 57 67 - -
Trme169951g00001 93 SUPERFAMILY Protein kinase-like (PK-like) 4 78 IPR011009 -
Trme169951g00001 93 ProSiteProfiles AGC-kinase C-terminal domain profile. 39 88 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme169951g00001 93 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme169951g00001 Trme-Chr169951 1 449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme169951g00001 1 72 AGC Kinase Gene Family AT3G23310 77.778 7.75e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme169951g00001 K08790 - gmx:100783286 135.576