Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme169430g00001 ACTGTTTCTGAAAAGACCAAGGAGAGTGAAGGAGACGCATGGGAGTTTTTGGGTCTCATGCCACTCTTTGACCCTCCAAGGCATGACAGTGCTGAGACTATTCGACAAGCTCTTGACCTTGGTGTTAATGTTAAGATGATCACTGGTGACCAACTTGCCATTGGAAAAGAAACCGGTCGCAGACTCGGAATGGGAACCAACATGTATCCTTCATCATCTCTTCTTGGTGATAACAAGGACCCTGATATTGCATCAATCTCAATTGATGAACTCATTGAGAAGGCTGATGGATTTGCCGG 299 0.4548 TVSEKTKESEGDAWEFLGLMPLFDPPRHDSAETIRQALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNKDPDIASISIDELIEKADGFAG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme169430g00001 100 PANTHER CALCIUM-TRANSPORTING ATPASE 10 100 - -
Trme169430g00001 100 SUPERFAMILY HAD-like 15 69 IPR036412 -
Trme169430g00001 100 Gene3D - 14 100 IPR023214 -
Trme169430g00001 100 PRINTS P-type cation-transporting ATPase superfamily signature 18 29 - -
Trme169430g00001 100 PRINTS P-type cation-transporting ATPase superfamily signature 40 50 - -
Trme169430g00001 100 FunFam Plasma membrane ATPase 15 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme169430g00001 Trme-Chr169430 202 500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme169430g00001 1 100 Primary Pumps ATPases AT1G80660 84.000 1.96e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme169430g00001 K01535 - gmx:100778065 185.267