Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme169078g00001 ATGGAATTAGTTGTGGTTGGTTTACATGGTCAACCACAAGCTGGGATTGATTATTTACCTGGTAGTATGAGTTCGAATGGAGAACCGATTGCTACTAGTGTGATTGTTTCGGGTGGTTATGAGGATGATGTTGATCAAGGTGATGTTATTATTTATTCTGGTCATGGTGGTCAGGATAARAATTCGAGGCAAGTTTTTCATCAGAAGTTGGAAGGTGGRAACCTTGCTATGGAGAGAAGTATGCATTATGGGATTGAAGTTAGGGTTATTCGCGGTGTTCGGTGTGAAGGTACTTCTTCTGCTTCTGGTAAGGTTTATGTTTATGATGGATTGTATAGGATTGTTGAATGTTGGTTTGATGTTGGTAAATCGGGTTTTGGTGTATATAAGTATAAGTTATGGAGGATTGAGGGTCAAGCCAAAATGGGTAGTTCGGTTTTGAAGGAGGCTCTTATGCTTAGG 462 0.3983 MELVVVGLHGQPQAGIDYLPGSMSSNGEPIATSVIVSGGYEDDVDQGDVIIYSGHGGQDKNSRQVFHQKLEGGNLAMERSMHYGIEVRVIRGVRCEGTSSASGKVYVYDGLYRIVECWFDVGKSGFGVYKYKLWRIEGQAKMGSSVLKEALMLR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme169078g00001 154 SUPERFAMILY PUA domain-like 1 147 IPR015947 -
Trme169078g00001 154 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 1 141 - -
Trme169078g00001 154 Pfam SAD/SRA domain 1 139 IPR003105 -
Trme169078g00001 154 SMART G9a_1 1 139 IPR003105 -
Trme169078g00001 154 Gene3D - 1 152 IPR036987 -
Trme169078g00001 154 ProSiteProfiles YDG domain profile. 1 135 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme169078g00001 Trme-Chr169078 1 462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme169078g00001 1 139 Su(var)3-9 homologs AT1G73100 48.921 1.87e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme169078g00001 K11420 - lja:Lj0g3v0293009.1 299.286