Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16898g00001 ATGGCTCACACATTCATGGACACACCAAGCTTTGAATCAAGACCTACTTCTCGTAGTCACTCGGCGCATCCACCAACCTATTCTTCAGAAGCGCCTTCTGAAGCGCCTTCTGAGTCGACCGTTGATTTTCCCGAAATTCCAAACTTTGCATCAGAATCGGGACAAGATCCATTTGGTGATTCATCTTCCTTCAAAGATGCAATCTCCGACATTCTCAGAGGATCGTTGTTCGGAAACTCCATGCCAATGCCTACGCAGCCTCACCATATATCCGAATCAAAACAAAGCAACCTCGGACTTGACCAAATATGTATGCACACAGATTACCCCGACGTTTGTATGACAACAATTAAACCTCTTGTAAGTCAAAATTTCGAAATAATTGATGTCCTCGCTGCGGCCATAAAAGTTTGTTCAATTGAAGTAAAATTGACAACAACAAAAGTGGCTAGACATGCCGCGAATAATCCGGAGGTTGCTAATGCAGTTGCTGAATGTCAAGAACAATACAAAATTGCTTCGGAAAATCTTCAAAGAGCAATGAAGGCTGTTCAATCGCGCGATCTTGGTACCATTACCGTTATGCTTAGTGCTGTTATGGCCGATGTTTCAACATGCGAGAGCGCTTTTGAGGATATAAGAAAATCACCTTCTTCTGACATGACTAAAACTGATGGTTTAGTTACTATTACTGTTAGCAATTCTCTTTCCATTGCTAATTTGGTTCCCTATTAG 735 0.419 MAHTFMDTPSFESRPTSRSHSAHPPTYSSEAPSEAPSESTVDFPEIPNFASESGQDPFGDSSSFKDAISDILRGSLFGNSMPMPTQPHHISESKQSNLGLDQICMHTDYPDVCMTTIKPLVSQNFEIIDVLAAAIKVCSIEVKLTTTKVARHAANNPEVANAVAECQEQYKIASENLQRAMKAVQSRDLGTITVMLSAVMADVSTCESAFEDIRKSPSSDMTKTDGLVTITVSNSLSIANLVPY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16898g00001 244 Gene3D Invertase/pectin methylesterase inhibitor family protein 98 242 IPR035513 -
Trme16898g00001 244 PANTHER PECTINESTERASE INHIBITOR-LIKE 90 242 - -
Trme16898g00001 244 Pfam Plant invertase/pectin methylesterase inhibitor 101 238 IPR006501 GO:0004857
Trme16898g00001 244 NCBIfam pectinesterase inhibitor domain 91 240 IPR006501 GO:0004857
Trme16898g00001 244 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 101 242 IPR035513 -
Trme16898g00001 244 CDD PMEI-like_2 100 242 - -
Trme16898g00001 244 MobiDBLite consensus disorder prediction 1 64 - -
Trme16898g00001 244 SMART PMEI_2 95 238 IPR006501 GO:0004857
Trme16898g00001 244 MobiDBLite consensus disorder prediction 9 36 - -
Trme16898g00001 244 Coils Coil 163 183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16898g00001 75 211 Carbohydrate Esterase AT2G26440 26.531 7.15e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16898g00001 - - vvo:131599737 253.062