Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme168571g00001 AATGTCTGGAGATCCACCACTCCAGAAGAAGTCCTTGCAATGTTTCTGGTGGAGTTAAGACTGATGACGGAATCTCATCTTAAACGACCGATAAGAAATGTAGTGCTTACGGTTCCAGTTTCCTTCAGTCGTTTCCAGCTGACTCGTCTTGAGCGTGCTTGTGCAATGGCTGGTCTTCATGTTCTCAGACTAATGCCTGAACCAACAGCAGTGGCATTGTTGTATGGACAGCAACAACAGAAAGCTTCTCAAGAAACTATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCGGGTTATTGTGATGTTGCTGTGACTGCTACCGCTGGAGGAGTATCCCAGATAAAAGCCTTGGCAGGAAGTACCGTTGGTGGAGAAGATTTGCTTCAGAATATGATGCGTCATCTCTTACCGGATGCTGAAAATATATTCAAGCGTCACGGGGTTGAAGAAATTAAATCAATGGCATTGCTTCGAGTTGCAACCCAGG 502 0.4522 NVWRSTTPEEVLAMFLVELRLMTESHLKRPIRNVVLTVPVSFSRFQLTRLERACAMAGLHVLRLMPEPTAVALLYGQQQQKASQETMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTVGGEDLLQNMMRHLLPDAENIFKRHGVEEIKSMALLRVATQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme168571g00001 167 SUPERFAMILY Actin-like ATPase domain 91 164 IPR043129 -
Trme168571g00001 167 PANTHER HEAT SHOCK PROTEIN 70KDA 5 158 IPR013126 GO:0005524|GO:0140662
Trme168571g00001 167 FunFam heat shock 70 kDa protein-like 4 99 - -
Trme168571g00001 167 Gene3D - 2 93 - -
Trme168571g00001 167 SUPERFAMILY Actin-like ATPase domain 5 78 IPR043129 -
Trme168571g00001 167 Pfam Hsp70 protein 6 162 IPR013126 GO:0005524|GO:0140662
Trme168571g00001 167 Gene3D - 94 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme168571g00001 Trme-Chr168571 1 502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme168571g00001 1 167 Calmodulin-binding Proteins AT1G16030 33.333 2.53e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme168571g00001 K09489 - qsa:O6P43_003374 289.271