Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16856g00001 ATGACTGCAGAATTTCATTTACCTAGTCCTGTTATACCTACTAGGGAGTGTTGTTTTGCAAGGTACTGCAAGAAATTCCCTTATAACAGATGGGCTGTTGTTGATGTATCTTTGGAAGACTTCTTTCCTTCTCCAACAAGTAATCTTCGAAAAAGACCTTCAGGCTGTGTCATTGTACCAACGGATAAAGGACCCACCCAG 201 0.4129 MTAEFHLPSPVIPTRECCFARYCKKFPYNRWAVVDVSLEDFFPSPTSNLRKRPSGCVIVPTDKGPTQ 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16856g00001 67 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 64 IPR042160 -
Trme16856g00001 67 Pfam START domain 1 66 IPR002913 GO:0008289
Trme16856g00001 67 SUPERFAMILY Bet v1-like 2 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16856g00001 Trme-Chr16856 254 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16856g00001 1 64 Homeobox Transcription Factor Family AT4G21750 56.250 1.96e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16856g00001 K09338 - rvl:131330444 87.0409