Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme168390g00001 ATGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTACAAGCTGTTAAGGTTGTTTTTCGGGTTTTGTTGAGTGGGGAGAAGAGGCTTTGTGATAGTCTTTTTGGTGATTTGGATGATTTAAAGGAGATTTGTTTCAATGAAACTGCTAAAG 181 0.3757 MSIEEVQKVEWKSLDEKMKNWVQAVKVVFRVLLSGEKRLCDSLFGDLDDLKEICFNETAK 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme168390g00001 60 SUPERFAMILY Cullin repeat-like 2 60 IPR016159 -
Trme168390g00001 60 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 60 IPR004140 GO:0000145|GO:0006887
Trme168390g00001 60 Pfam Exo70 exocyst complex subunit 19 60 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme168390g00001 60 Gene3D Exocyst complex component Exo70 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme168390g00001 Trme-Chr168390 39 219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme168390g00001 1 60 EXO70 exocyst subunit family AT5G50380 63.333 5.54e-23 87.8