Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16766g00001 GACTGTGATCATATCGCTTATGACNTTCCATTTTCATCAAGCCACTTACAATCCGATTGGAGGACTGTGATCATATCGCTTATGACTGGTGGACTATCACTAGGTCAGGCAACCCCAAGCTTAAATGCATTTGCGGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACCATTAAAAGAAAGCCGAAAATCGATGCCTATGATACAAGTGGCGTTGTTTTGGAAGACATAAAGGGAGATATTGAACTTAAAGATGTTTACTTCAGATACCCTGCAAGGCCAGATGTTCAGATATTTGCTGGATTCTCACTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTAGGTCAAAGTGGAAGGGGAAAGTCCACTGTAATCAGTTTATTGGAAAGATTCTATGACCCTGATGCTGGAGAAGTACTTATAGACGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAGGAGATAACAACAGCAATAACACTTGCTAATGCAAAAAAGTTCATTGACAAACTACCTCAGGGTCTTGACACCATGGCAGGGCCAAATGGGACTCAACTTTCTGGCGGGCAAAAGCAAAGAATTGCAATTGCAAGAGCAATATTGAA 614 0.4186 DCDHIAYDXPFSSSHLQSDWRTVIISLMTGGLSLGQATPSLNAFAAGQAAAYKMFETIKRKPKIDAYDTSGVVLEDIKGDIELKDVYFRYPARPDVQIFAGFSLFVPSGTTTALVGQSGRGKSTVISLLERFYDPDAGEVLIDENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGPNGTQLSGGQKQRIAIARAIL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16766g00001 204 Gene3D - 144 204 IPR027417 -
Trme16766g00001 204 Gene3D - 71 143 IPR027417 -
Trme16766g00001 204 Pfam ABC transporter 102 204 IPR003439 GO:0005524
Trme16766g00001 204 PANTHER ABC TRANSPORTER B FAMILY 22 143 IPR039421 -
Trme16766g00001 204 Gene3D ABC transporter type 1, transmembrane domain 22 70 IPR036640 GO:0005524|GO:0016020
Trme16766g00001 204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 204 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16766g00001 Trme-Chr16766 547 1450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16766g00001 24 204 Calmodulin-binding Proteins AT2G36910 48.585 3.86e-52 178