Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme167652g00001 ATGCCTGGAAACATTCTAGAGATCGAGCTTCATAATTTCATGACATTTGATTACTTAAAATGTAAACCTGGGCCTCGGTTGAATCTCGTAATTGGGCCTAATGGTTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTTGGCCTATGTGGAGAGCCCCAGTTGCTTGGGCGAGCCACGAGTGTCGGGGCATATGTGAAGAGGGGAGAAGAGTCTGGGCACGTTAAGATTACCTTAAGAGGAGACCAGAAAGAAGAGAACATTACGATTATGCGTAAAATAAATACTAGCAACAAGTCTGAATGGTTTTTCAATGGTGGGATTTTTAACTAA 333 0.4234 MPGNILEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSVGAYVKRGEESGHVKITLRGDQKEENITIMRKINTSNKSEWFFNGGIFN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme167652g00001 110 Gene3D - 4 108 IPR027417 -
Trme167652g00001 110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 109 IPR027417 -
Trme167652g00001 110 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 106 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Trme167652g00001 110 Pfam AAA domain 8 98 IPR038729 GO:0006302|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme167652g00001 1 106 Structural Maintenance of Chromosomes family AT5G15920 82.075 1.67e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme167652g00001 K22803 - gmx:100778678 201.83