Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme167569g00001 GTTGGTGGATGGACTCAAGTTTATGGAAATATTCTCTCATTTGCTACAATCAGAGGTGCATCTCATGAAGCTCCTTTCTCACAACCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGACAGACCTTTACCTGAAATTTTCTAA 150 0.3733 VGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme167569g00001 49 Gene3D - 1 45 - -
Trme167569g00001 49 ProSitePatterns Serine carboxypeptidases, histidine active site. 12 29 IPR033124 GO:0004185
Trme167569g00001 49 SUPERFAMILY alpha/beta-Hydrolases 2 46 IPR029058 -
Trme167569g00001 49 Pfam Serine carboxypeptidase 1 41 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme167569g00001 Trme-Chr167569 208 357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme167569g00001 1 45 Calmodulin-binding Proteins AT2G22960 33.333 2.73e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme167569g00001 K16297 - gmx:100800002 102.834