Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16720g00001 TCTGATGTACCTGCTGGACACGTGGCAGTATGTGTTGGTGCTAACTACACCAGATTTGTAGTGCGCGCTACGCACCTGAACCACCCTATTTTCCAGAAGCTTCTTGTTCAAGCTGAAGAAGAGTATGGTTTCTCTAACTACGGACCCCTTACCATCCCTTGTGATGAAGACTTTTTTGAAGAGGCTCTCCGGTTCATTTCCCGGTCTGGTTCAAATATTGGACCGAACCGGTTCGTTAATCTCGAGGTTGAAGATATTAAGAAGCGCTGCCACGTGGGAATTAGAAATAACGCGGATTTCTGGCCTGAATCTCGACCGCTCCTACATGGTCTTAGTGAAAAAACAATGTGGTAG 354 0.4661 SDVPAGHVAVCVGANYTRFVVRATHLNHPIFQKLLVQAEEEYGFSNYGPLTIPCDEDFFEEALRFISRSGSNIGPNRFVNLEVEDIKKRCHVGIRNNADFWPESRPLLHGLSEKTMW 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16720g00001 117 Pfam Auxin responsive protein 1 65 IPR003676 GO:0009733
Trme16720g00001 117 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 63 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16720g00001 Trme-Chr16720 2 355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16720g00001 1 116 Calmodulin-binding Proteins AT4G34750 53.782 5.60e-38 123