Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme167012g00001 ATGGCTCCAGAGTATGCAATGCATGGAGAATTCTCGGTAAAGTCTGATGTATATAGTTTTGGAGTTCTCATTATGGAGATTATAAGTGGCAAGAAGAATAGCTCTTTCTATGGCACTGATGGTACCGACGATATACTCAGCTATACATGGAAAGTTTGGAAAGATGGAGCACCATTAGAACTAGTGGATCCCACATTAAGAGAATCTCATACTCCAAATGAAATTATCAGAAGCATCCATATTG 244 0.3852 MAPEYAMHGEFSVKSDVYSFGVLIMEIISGKKNSSFYGTDGTDDILSYTWKVWKDGAPLELVDPTLRESHTPNEIIRSIHI 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme167012g00001 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme167012g00001 81 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Trme167012g00001 81 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 81 - -
Trme167012g00001 81 Pfam Protein tyrosine and serine/threonine kinase 1 32 IPR001245 GO:0004672|GO:0006468
Trme167012g00001 81 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme167012g00001 Trme-Chr167012 102 478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme167012g00001 1 81 Receptor kinase-like Gene Family AT3G45860 61.446 2.13e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme167012g00001 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme167012g00001 - - pvu:PHAVU_002G049500g 143.665