Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme166634g00001 ATTCTAGCTGCTACAAACAGTTTTTCTATTGAGAACAAGATTGGAGAAGGAGGTTTTGGCCCAGTGTACAAGGGCATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTTTCAAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTCGCCAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGGTGTACTTATGGAAATGAAAGAATGTTGGTCTATGAATTCATGCCTAATGGTAGTTTGAACCACTTCATTTTCG 283 0.4028 ILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERMLVYEFMPNGSLNHFIF 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme166634g00001 94 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 94 - -
Trme166634g00001 94 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1 83 - -
Trme166634g00001 94 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Trme166634g00001 94 ProSiteProfiles Protein kinase domain profile. 8 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme166634g00001 94 SUPERFAMILY Protein kinase-like (PK-like) 3 93 IPR011009 -
Trme166634g00001 94 Pfam Protein tyrosine and serine/threonine kinase 9 93 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme166634g00001 Trme-Chr166634 136 506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme166634g00001 1 94 Receptor kinase-like Gene Family AT4G04490 68.085 3.89e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme166634g00001 PK_Tyr_Ser-Thr 2.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme166634g00001 - - gmx:102669607 170.244