Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16662g00001 TCACAGAGATCTGCACCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGGCATGGAAAATCCTCTAAAGGAAGCGTGGAGCCATTGCTTGGTTCCCGTTTTACAGCTAAGCTCCGTGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACACTGGAATGAAATGCTCAAAAATGATGCTATCAAGTTTTGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAAAGGATTACATTGATATCTGAGGCTGCAAATACAGAGAGACCATCTGCTGTTACAA 400 0.405 SQRSAPRASPSSGNRDFCDSASPMSREGWHGKSSKGSVEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKFCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERITLISEAANTERPSAVT 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16662g00001 133 MobiDBLite consensus disorder prediction 1 39 - -
Trme16662g00001 133 MobiDBLite consensus disorder prediction 1 19 - -
Trme16662g00001 133 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 4 133 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16662g00001 Trme-Chr16662 196 1136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16662g00001 2 132 Protein tyrosine phosphatase (PTP) family AT5G23720 66.412 3.89e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16662g00001 K14165 - gmx:102661225 216.083