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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trme1665g00001
CCTCCTCCTTCCTCTTCTCGTGCCAAAGACTTCTTCCCCTCTCCAGCTCTCTCTCTTAGCCTTGCAGGGATTTTTCGGCATGGTGGATTGGCGGCGGAGGGTGAAGGGGCAAGTACTAGTAACATGGAGGTGGAGGAAGGGGAGGAAGGGAGTACCGTTGGAGGTGATCAACGCGTTGAGGAAATTAGTAGTGAGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTAGAACCCAAATCAAGGCAATACAAGAGAGACATGAAAATTCATTGTTGAAAACTGAAATAGAGAAATTAAGAGAGAAAAATAAGACCCTAAGAGAGACCATAAACAAAGCTTGTTGCCCCAATTGTGGGGTACCCACTACAAACAAAGATGGTGCCATGCCAACCGAAGAACAACAACTACGTATTGAAAATGTCAAACTCAAAGCTGAGGTAGAGAAGCTACGAGCAGCTTTAGGGAAACATGCATCTGGTACAATGTCACCTTCATGTTCTACTAGCCATGACCAAGAAAATATTAAAAGCTCTTTGGATTTTTACACTGGAATTTTTGGTCTTGATGAATCAAGAATAATGGATGTAGTGAACCAAGCAATGGATGAACTTATAAAGATGGCTACAATGGATGAACCATTGTGGCTACGTAGCTTAGAGACTGGTCGTGAAATACTTAATTATGATGAATATATGAAGGAGTTTGTAGTTGAAAATTCAGATAATGGAAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCAAGGATTGTCCAATGTTTTCTTGATGCTGTAAGATACAAATTAATGCTTATACATTCTTAA
918
0.4074
PPPSSSRAKDFFPSPALSLSLAGIFRHGGLAAEGEGASTSNMEVEEGEEGSTVGGDQRVEEISSELFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLREKNKTLRETINKACCPNCGVPTTNKDGAMPTEEQQLRIENVKLKAEVEKLRAALGKHASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMDELIKMATMDEPLWLRSLETGREILNYDEYMKEFVVENSDNGRPKRSIEASRDTGVVFADLPRIVQCFLDAVRYKLMLIHS
305
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trme1665g00001
305
PRINTS
Lambda-repressor HTH signature
86
102
IPR000047
GO:0003677
Trme1665g00001
305
PRINTS
Lambda-repressor HTH signature
77
86
IPR000047
GO:0003677
Trme1665g00001
305
Coils
Coil
156
176
-
-
Trme1665g00001
305
ProSitePatterns
'Homeobox' domain signature.
81
104
IPR017970
GO:0000981|GO:0006355
Trme1665g00001
305
Gene3D
-
62
105
-
-
Trme1665g00001
305
Pfam
START domain
220
299
IPR002913
GO:0008289
Trme1665g00001
305
SMART
HOX_1
57
110
IPR001356
GO:0003677
Trme1665g00001
305
ProSiteProfiles
'Homeobox' domain profile.
67
106
IPR001356
GO:0003677
Trme1665g00001
305
MobiDBLite
consensus disorder prediction
32
56
-
-
Trme1665g00001
305
ProSiteProfiles
START domain profile.
209
257
IPR002913
GO:0008289
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trme1665g00001
Trme-Chr1665
2
2952
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trme1665g00001
66
299
Homeobox Transcription Factor Family
AT1G79840
61.017
9.85e-90
280
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Trme1665g00001
START
8.4e-07
CL0209
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trme1665g00001
K09338
-
gmx:100809926
441.039
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