LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme1665g00001	CCTCCTCCTTCCTCTTCTCGTGCCAAAGACTTCTTCCCCTCTCCAGCTCTCTCTCTTAGCCTTGCAGGGATTTTTCGGCATGGTGGATTGGCGGCGGAGGGTGAAGGGGCAAGTACTAGTAACATGGAGGTGGAGGAAGGGGAGGAAGGGAGTACCGTTGGAGGTGATCAACGCGTTGAGGAAATTAGTAGTGAGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGCCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTAGAACCCAAATCAAGGCAATACAAGAGAGACATGAAAATTCATTGTTGAAAACTGAAATAGAGAAATTAAGAGAGAAAAATAAGACCCTAAGAGAGACCATAAACAAAGCTTGTTGCCCCAATTGTGGGGTACCCACTACAAACAAAGATGGTGCCATGCCAACCGAAGAACAACAACTACGTATTGAAAATGTCAAACTCAAAGCTGAGGTAGAGAAGCTACGAGCAGCTTTAGGGAAACATGCATCTGGTACAATGTCACCTTCATGTTCTACTAGCCATGACCAAGAAAATATTAAAAGCTCTTTGGATTTTTACACTGGAATTTTTGGTCTTGATGAATCAAGAATAATGGATGTAGTGAACCAAGCAATGGATGAACTTATAAAGATGGCTACAATGGATGAACCATTGTGGCTACGTAGCTTAGAGACTGGTCGTGAAATACTTAATTATGATGAATATATGAAGGAGTTTGTAGTTGAAAATTCAGATAATGGAAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCAAGGATTGTCCAATGTTTTCTTGATGCTGTAAGATACAAATTAATGCTTATACATTCTTAA	918	0.4074	PPPSSSRAKDFFPSPALSLSLAGIFRHGGLAAEGEGASTSNMEVEEGEEGSTVGGDQRVEEISSELFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLREKNKTLRETINKACCPNCGVPTTNKDGAMPTEEQQLRIENVKLKAEVEKLRAALGKHASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMDELIKMATMDEPLWLRSLETGREILNYDEYMKEFVVENSDNGRPKRSIEASRDTGVVFADLPRIVQCFLDAVRYKLMLIHS	305

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Trme1665g00001	305	PRINTS	Lambda-repressor HTH signature	86	102	IPR000047	GO:0003677
Trme1665g00001	305	PRINTS	Lambda-repressor HTH signature	77	86	IPR000047	GO:0003677
Trme1665g00001	305	Coils	Coil	156	176	-	-
Trme1665g00001	305	ProSitePatterns	'Homeobox' domain signature.	81	104	IPR017970	GO:0000981\|GO:0006355
Trme1665g00001	305	Gene3D	-	62	105	-	-
Trme1665g00001	305	Pfam	START domain	220	299	IPR002913	GO:0008289
Trme1665g00001	305	SMART	HOX_1	57	110	IPR001356	GO:0003677
Trme1665g00001	305	ProSiteProfiles	'Homeobox' domain profile.	67	106	IPR001356	GO:0003677
Trme1665g00001	305	MobiDBLite	consensus disorder prediction	32	56	-	-
Trme1665g00001	305	ProSiteProfiles	START domain profile.	209	257	IPR002913	GO:0008289

Showing 1 to 10 of 15 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme1665g00001	Trme-Chr1665	2	2952	Dispersed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme1665g00001	66	299	Homeobox Transcription Factor Family	AT1G79840	61.017	9.85e-90	280

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-HD-ZIP	Trme1665g00001		START	8.4e-07	CL0209

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme1665g00001	K09338		-	gmx:100809926	441.039

Showing 1 to 1 of 1 entries