Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16644g00001 ATGGTAATGATTTCAAGCACCAGTTCATACAGTTGTGCAACCGCCCTGTATCTGAATCTTTCTTGCCTCGAAGAAGCCAAGCCAGTGATTGGCGCGAGTCAGGCTGTGCAGTTCCTGATCCAGATGCTTCAACCTAAGACAGAAGTCCAGTGCAAGATGGATGCCCTTCACGCACTCTATAATATTTCTACTGTGTCCTCGAATATTTCAAACCTTATTTCTTCTGGCATCATCAATGGCCTACAATCCCTTCTTGTAGGCCAAACTGATTGCATGTGGTCAGAAAAATGCATAGCTGTTTTGGTTAATTTGGCGGTTTCTCAGGTAGGAAGAGATGAAATGATCTTGAATCCTGAAGTGATAACCACGTTGGCTTCTATACTCGATACCGGTGAATCCATAGAGCAGGAACAAGCTGTGTCTTGTCTCCTAATATTATGTAACAGGAGTGAGAAATGTTGTGAGATGGTCTTGCAAGAAGGGGCTATACCTGCATTGGTGTCAATATCGGTAAATGGAACCTCAAGAGGAAGAGAGAAAGCTCAAAAGCTGTTGATGCTCTTTCGAGAGCAGCGACAGCGAGACCATTCACCTGCTAAGACTCAATACTGCTCACCTGAAGCTGGTGATTTGTCCATGCCTTCTCCAGAAGCGAAACCGCTAAGTAAATCAATATCTAGAAGAAGAGTGGGGAAAGCTTTAAGTTTTCTATGGAAAAGCAAGAGCTATTCTGTTTACCAGTGCTAG 747 0.4378 MVMISSTSSYSCATALYLNLSCLEEAKPVIGASQAVQFLIQMLQPKTEVQCKMDALHALYNISTVSSNISNLISSGIINGLQSLLVGQTDCMWSEKCIAVLVNLAVSQVGRDEMILNPEVITTLASILDTGESIEQEQAVSCLLILCNRSEKCCEMVLQEGAIPALVSISVNGTSRGREKAQKLLMLFREQRQRDHSPAKTQYCSPEAGDLSMPSPEAKPLSKSISRRRVGKALSFLWKSKSYSVYQC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16644g00001 248 Gene3D - 7 193 IPR011989 -
Trme16644g00001 248 SUPERFAMILY ARM repeat 19 185 IPR016024 -
Trme16644g00001 248 MobiDBLite consensus disorder prediction 192 224 - -
Trme16644g00001 248 PANTHER U BOX DOMAIN-CONTAINING 9 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16644g00001 Trme-Chr16644 638 1384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16644g00001 3 247 U-box Gene Family AT1G24330 58.268 2.45e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16644g00001 - - gmx:100804344 372.859