Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16618g00001 GATGCATATACTACTGGCTTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTTCAGAGTTGGCATTTCTGAACTCTATGAAGATGAAAATGTCCATTCTGTTTGGTGTGGCACATATGAATTTGGGAATTATATTAAGTTATTTCAATGCTCGTTTCTTTGGAAGCTCACTGGATATAAGGTACCAATTTGTGCCACAGATGATTTTCCTTAACAGTCTGTTTGGATATCTTTCCCTTCTCATCATTGTTAAGTGGTGTTCTGGCTCTCAAGCAGACCTTTATCACGTGATGATATATATGTTTTTAAGCCCTACAGACGAACTTGATTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTCATACCGAG 436 0.3876 DAYTTGLVKYRDPYPFGVDPSWRGSRSELAFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHVMIYMFLSPTDELDCVIAFGFNCSSMDALSKTFYTKEASYR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16618g00001 145 PANTHER VACUOLAR PROTON ATPASES 1 117 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trme16618g00001 145 Pfam V-type ATPase 116kDa subunit family 9 116 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16618g00001 Trme-Chr16618 348 1002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16618g00001 1 117 Primary Pumps ATPases(2) AT2G28520 87.179 1.75e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16618g00001 K02154 - aof:109821114 225.328