Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme166095g00001 GAACGTTACCTCGTTGACCGTGAACTCGGTCGCGGCGAGTTCGGTGTAACCTATCTCTGTATCGATCGTGATACTAGAGAGCTTCTTGCTTGTAAGAGTATTTCCAAAAGGAAGCTTCGTACTGCTGTTGATATTGATGATGTGAGACGTGAAGTTGCTATTATGCGTCATTTACCTAAGAGTTCGAGTATTGTTACTCTTCGTGAAGCTTGTGAAGATGATAATGCTGTTCATCTTGTTATGGAGCTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTGCTAGAGGTCATTATACTGAGCGTGCTGCTGCGGCGGTTGCGAAGACTATTGTTGAGGTTGTTCAGCTTTGTCATAAACATGGTGTGATTCATCGTGATCTTAAGCCGGAGAATTTCTTGTTTGCTAATAAGAAGGAGAATTCGCCTCTTAAGGCTATTGATTTTGGGCTTTCTATATTCTTCAAGCCAG 472 0.4258 ERYLVDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDIDDVRREVAIMRHLPKSSSIVTLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVAKTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme166095g00001 157 Pfam Protein kinase domain 5 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme166095g00001 157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Trme166095g00001 157 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Trme166095g00001 157 SMART serkin_6 3 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme166095g00001 157 ProSiteProfiles Protein kinase domain profile. 3 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme166095g00001 157 Gene3D Phosphorylase Kinase; domain 1 4 88 - -
Trme166095g00001 157 SUPERFAMILY Protein kinase-like (PK-like) 1 155 IPR011009 -
Trme166095g00001 157 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 156 - -
Trme166095g00001 157 Gene3D Transferase(Phosphotransferase) domain 1 89 157 - -
Trme166095g00001 157 FunFam Calcium-dependent protein kinase 1 5 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme166095g00001 Trme-Chr166095 37 508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme166095g00001 1 157 EF-hand Containing Proteins AT3G51850 92.357 9.04e-106 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme166095g00001 Pkinase 3.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme166095g00001 K13412 - cit:102610908 306.605