Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme166005g00001 ATGCAAGGTTTACAATGGCCTGGTTTGTTTCATATTCTTGCTTCGAGACCCGGTGGACCGCCTTATGTGAGACTCACTGGATTAGGTACTTCCATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGATTTTGCATCTAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAGAAAGTTGGAAACATTGATCCTGATAAGCTTAATGTTAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTGCAACATTCTTTATATGATGTTACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAG 308 0.3994 MQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFASKLGLPFEFFPVAEKVGNIDPDKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQ 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme166005g00001 102 Pfam GRAS domain family 1 96 IPR005202 -
Trme166005g00001 102 ProSiteProfiles GRAS family profile. 1 102 IPR005202 -
Trme166005g00001 102 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 84 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme166005g00001 Trme-Chr166005 22 329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme166005g00001 1 102 GRAS Transcription Factor Family AT3G54220 86.275 4.00e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme166005g00001 GRAS 1.7e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme166005g00001 - - mnt:21405559 203.756