Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1658g00001 ATGTATGTGAAAGTGCCTCCCGTTCTAATTCAAAAGGTATTTAATCAGACGTTTCAATACATCAACGCAGAAATCTTTAACAGCCTTATATTGCATAAAGAATGTTGCACACTCAACAATGGAGAATATGTAAAATCAGGGTTAGCTGAACTAGAACAATGGTGTAATGAAGTAACCGAAGAGTATGCTGGCACATCTTTGGATGAACTCAACCATGCAAAACAAGCAGTTAGATTCATGGTTTCTGAAAAGAAGGATGAACTATCCTATGATGATCTTACAAATGACATCTGCCCTGTGCTGAGTTCTCAACAGCTTTATAGAATATGTACACTATTCTTGGATGAAAATGACAATACCAAAAGTGTATCAACAGATGTCACTACTAGATTAAAGCTTCTAATGACAGATGATGTAGTTGATGATGACAAATCCTTCTTATTAGAAGACAATTCAAG 458 0.3537 MYVKVPPVLIQKVFNQTFQYINAEIFNSLILHKECCTLNNGEYVKSGLAELEQWCNEVTEEYAGTSLDELNHAKQAVRFMVSEKKDELSYDDLTNDICPVLSSQQLYRICTLFLDENDNTKSVSTDVTTRLKLLMTDDVVDDDKSFLLEDNS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1658g00001 152 ProSiteProfiles Dilute domain profile. 1 137 IPR002710 -
Trme1658g00001 152 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 4 138 - -
Trme1658g00001 152 SMART DIL_2 12 119 IPR002710 -
Trme1658g00001 152 Pfam DIL domain 13 114 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1658g00001 Trme-Chr1658 1393 2894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1658g00001 5 152 Myosins gene family AT4G28710 61.745 3.86e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1658g00001 K10357 - gmx:100791031 246.514